Cluster: HRGMv2_2957_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2957
- CGC Family ID: CGCFAM_02064
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2957_3 | HRGMv2_2957_3_131 | 152546 | 153961 | - | GH39 |
| STP | HRGMv2_2957_3 | HRGMv2_2957_3_132 | 154266 | 155075 | + | SBP_bac_3 |
| TC | HRGMv2_2957_3 | HRGMv2_2957_3_133 | 155165 | 155824 | + | 3.A.1.3.14 |
| TC | HRGMv2_2957_3 | HRGMv2_2957_3_134 | 155834 | 156589 | + | 3.A.1.3.10 |
Gene ID: HRGMv2_2957_3_131
Type: CAZyme
Location: 152546 - 153961 (-)
Type: CAZyme
Location: 152546 - 153961 (-)
Gene ID: HRGMv2_2957_3_132
Type: STP
Location: 154266 - 155075 (+)
Type: STP
Location: 154266 - 155075 (+)
Gene ID: HRGMv2_2957_3_133
Type: TC
Location: 155165 - 155824 (+)
Type: TC
Location: 155165 - 155824 (+)
Gene ID: HRGMv2_2957_3_134
Type: TC
Location: 155834 - 156589 (+)
Type: TC
Location: 155834 - 156589 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-390
Species
CAG-390 sp900753295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.