Cluster: HRGMv2_2957_CGC25
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2957
- CGC Family ID: CGCFAM_10261
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2957_20 | HRGMv2_2957_20_13 | 11885 | 13111 | - | GH33 |
| pfam | HRGMv2_2957_20 | HRGMv2_2957_20_14 | 13384 | 14154 | + | HpcH_HpaI |
| TC | HRGMv2_2957_20 | HRGMv2_2957_20_15 | 14542 | 16482 | - | 3.A.1.121.4 |
Gene ID: HRGMv2_2957_20_13
Type: CAZyme
Location: 11885 - 13111 (-)
Type: CAZyme
Location: 11885 - 13111 (-)
Gene ID: HRGMv2_2957_20_14
Type: pfam
Location: 13384 - 14154 (+)
Type: pfam
Location: 13384 - 14154 (+)
Gene ID: HRGMv2_2957_20_15
Type: TC
Location: 14542 - 16482 (-)
Type: TC
Location: 14542 - 16482 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-390
Species
CAG-390 sp900753295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.