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Cluster: HRGMv2_2957_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2957_17 HRGMv2_2957_17_4 9442 10416 + GT2
NULL(UNKNOWN) HRGMv2_2957_17 HRGMv2_2957_17_5 10428 11930 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2957_17 HRGMv2_2957_17_6 11931 13094 + GT4
NULL(UNKNOWN) HRGMv2_2957_17 HRGMv2_2957_17_7 13091 14461 + NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_2957_17 HRGMv2_2957_17_8 14661 15227 + TetR_N
TC HRGMv2_2957_17 HRGMv2_2957_17_9 15275 15979 + 3.A.1.147.6
NULL(UNKNOWN) HRGMv2_2957_17 HRGMv2_2957_17_10 15983 17581 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2957_17 HRGMv2_2957_17_11 17613 18527 + 3.A.1.105.3
Gene ID: HRGMv2_2957_17_4
Type: CAZyme
Location: 9442 - 10416 (+)
Gene ID: HRGMv2_2957_17_5
Type:
Location: 10428 - 11930 (+)
Gene ID: HRGMv2_2957_17_6
Type: CAZyme
Location: 11931 - 13094 (+)
Gene ID: HRGMv2_2957_17_7
Type:
Location: 13091 - 14461 (+)
Gene ID: HRGMv2_2957_17_8
Type: STP
Location: 14661 - 15227 (+)
Gene ID: HRGMv2_2957_17_9
Type: TC
Location: 15275 - 15979 (+)
Gene ID: HRGMv2_2957_17_10
Type:
Location: 15983 - 17581 (+)
Gene ID: HRGMv2_2957_17_11
Type: TC
Location: 17613 - 18527 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
CAG-390
→
Species
CAG-390 sp900753295

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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