Cluster: HRGMv2_2957_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2957
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2957_13 | HRGMv2_2957_13_30 | 29129 | 30298 | - | GH179 |
| TC | HRGMv2_2957_13 | HRGMv2_2957_13_31 | 30450 | 33173 | + | 3.A.3.2.22 |
| TF | HRGMv2_2957_13 | HRGMv2_2957_13_32 | 33893 | 34657 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_2957_13 | HRGMv2_2957_13_33 | 34774 | 37779 | + | GH2 |
Gene ID: HRGMv2_2957_13_30
Type: CAZyme
Location: 29129 - 30298 (-)
Type: CAZyme
Location: 29129 - 30298 (-)
Gene ID: HRGMv2_2957_13_31
Type: TC
Location: 30450 - 33173 (+)
Type: TC
Location: 30450 - 33173 (+)
Gene ID: HRGMv2_2957_13_32
Type: TF
Location: 33893 - 34657 (-)
Type: TF
Location: 33893 - 34657 (-)
Gene ID: HRGMv2_2957_13_33
Type: CAZyme
Location: 34774 - 37779 (+)
Type: CAZyme
Location: 34774 - 37779 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-390
Species
CAG-390 sp900753295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.