Cluster: HRGMv2_2957_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2957
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2957_11 | HRGMv2_2957_11_36 | 37632 | 39968 | - | GH106 |
| pfam | HRGMv2_2957_11 | HRGMv2_2957_11_37 | 40205 | 40678 | + | Ribosomal_S6 |
| TC | HRGMv2_2957_11 | HRGMv2_2957_11_38 | 40731 | 41201 | + | 3.A.7.19.1 |
| pfam | HRGMv2_2957_11 | HRGMv2_2957_11_39 | 41305 | 41577 | + | Ribosomal_S18 |
| TC | HRGMv2_2957_11 | HRGMv2_2957_11_40 | 41809 | 43173 | + | 2.A.38.1.1 |
| TC | HRGMv2_2957_11 | HRGMv2_2957_11_41 | 43187 | 44632 | + | 2.A.38.1.1 |
Gene ID: HRGMv2_2957_11_36
Type: CAZyme
Location: 37632 - 39968 (-)
Type: CAZyme
Location: 37632 - 39968 (-)
Gene ID: HRGMv2_2957_11_37
Type: pfam
Location: 40205 - 40678 (+)
Type: pfam
Location: 40205 - 40678 (+)
Gene ID: HRGMv2_2957_11_38
Type: TC
Location: 40731 - 41201 (+)
Type: TC
Location: 40731 - 41201 (+)
Gene ID: HRGMv2_2957_11_39
Type: pfam
Location: 41305 - 41577 (+)
Type: pfam
Location: 41305 - 41577 (+)
Gene ID: HRGMv2_2957_11_40
Type: TC
Location: 41809 - 43173 (+)
Type: TC
Location: 41809 - 43173 (+)
Gene ID: HRGMv2_2957_11_41
Type: TC
Location: 43187 - 44632 (+)
Type: TC
Location: 43187 - 44632 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-390
Species
CAG-390 sp900753295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.