Cluster: HRGMv2_2957_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2957
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2957_7 | HRGMv2_2957_7_14 | 19984 | 21849 | - | GH127 |
| TC | HRGMv2_2957_7 | HRGMv2_2957_7_15 | 21879 | 22238 | - | 9.B.55.2.1 |
| CAZyme | HRGMv2_2957_7 | HRGMv2_2957_7_16 | 22514 | 24292 | + | GH2 |
| pfam | HRGMv2_2957_7 | HRGMv2_2957_7_17 | 24289 | 24900 | + | DUF3267 |
| TC | HRGMv2_2957_7 | HRGMv2_2957_7_18 | 25007 | 27703 | - | 3.A.1.122.2 |
Gene ID: HRGMv2_2957_7_14
Type: CAZyme
Location: 19984 - 21849 (-)
Type: CAZyme
Location: 19984 - 21849 (-)
Gene ID: HRGMv2_2957_7_15
Type: TC
Location: 21879 - 22238 (-)
Type: TC
Location: 21879 - 22238 (-)
Gene ID: HRGMv2_2957_7_16
Type: CAZyme
Location: 22514 - 24292 (+)
Type: CAZyme
Location: 22514 - 24292 (+)
Gene ID: HRGMv2_2957_7_17
Type: pfam
Location: 24289 - 24900 (+)
Type: pfam
Location: 24289 - 24900 (+)
Gene ID: HRGMv2_2957_7_18
Type: TC
Location: 25007 - 27703 (-)
Type: TC
Location: 25007 - 27703 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-390
Species
CAG-390 sp900753295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.