dbCAN Logo

Cluster: HRGMv2_2957_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2957_5 HRGMv2_2957_5_130 145236 146270 - CE15
TF HRGMv2_2957_5 HRGMv2_2957_5_131 146414 146863 + 0040517
pfam HRGMv2_2957_5 HRGMv2_2957_5_132 146856 147626 + TauE
TC HRGMv2_2957_5 HRGMv2_2957_5_133 147700 150219 - 3.A.3.5.15
pfam HRGMv2_2957_5 HRGMv2_2957_5_134 150269 150577 - Trns_repr_metal
TC HRGMv2_2957_5 HRGMv2_2957_5_135 150723 152360 - 3.A.1.135.7
TC HRGMv2_2957_5 HRGMv2_2957_5_136 152347 154089 - 3.A.1.106.14
TF HRGMv2_2957_5 HRGMv2_2957_5_137 154091 154564 - MarR
TC HRGMv2_2957_5 HRGMv2_2957_5_138 154716 155864 - 2.A.45.2.6
Gene ID: HRGMv2_2957_5_130
Type: CAZyme
Location: 145236 - 146270 (-)
Gene ID: HRGMv2_2957_5_131
Type: TF
Location: 146414 - 146863 (+)
Gene ID: HRGMv2_2957_5_132
Type: pfam
Location: 146856 - 147626 (+)
Gene ID: HRGMv2_2957_5_133
Type: TC
Location: 147700 - 150219 (-)
Gene ID: HRGMv2_2957_5_134
Type: pfam
Location: 150269 - 150577 (-)
Gene ID: HRGMv2_2957_5_135
Type: TC
Location: 150723 - 152360 (-)
Gene ID: HRGMv2_2957_5_136
Type: TC
Location: 152347 - 154089 (-)
Gene ID: HRGMv2_2957_5_137
Type: TF
Location: 154091 - 154564 (-)
Gene ID: HRGMv2_2957_5_138
Type: TC
Location: 154716 - 155864 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
CAG-390
→
Species
CAG-390 sp900753295

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List