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Cluster: HRGMv2_2957_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2957_5 HRGMv2_2957_5_101 113380 114081 + 3.A.1.122.14
pfam HRGMv2_2957_5 HRGMv2_2957_5_102 114089 117100 + FtsX | FtsX
TC HRGMv2_2957_5 HRGMv2_2957_5_103 117107 119260 - 9.A.8.1.5
STP HRGMv2_2957_5 HRGMv2_2957_5_104 119257 119592 - FeoA
TC HRGMv2_2957_5 HRGMv2_2957_5_105 119692 121440 + 3.A.1.135.5
TC HRGMv2_2957_5 HRGMv2_2957_5_106 121430 123364 + 3.A.1.135.5
CAZyme HRGMv2_2957_5 HRGMv2_2957_5_107 123548 124357 + CE4
CAZyme HRGMv2_2957_5 HRGMv2_2957_5_108 124354 125049 + CE4
Gene ID: HRGMv2_2957_5_101
Type: TC
Location: 113380 - 114081 (+)
Gene ID: HRGMv2_2957_5_102
Type: pfam
Location: 114089 - 117100 (+)
Gene ID: HRGMv2_2957_5_103
Type: TC
Location: 117107 - 119260 (-)
Gene ID: HRGMv2_2957_5_104
Type: STP
Location: 119257 - 119592 (-)
Gene ID: HRGMv2_2957_5_105
Type: TC
Location: 119692 - 121440 (+)
Gene ID: HRGMv2_2957_5_106
Type: TC
Location: 121430 - 123364 (+)
Gene ID: HRGMv2_2957_5_107
Type: CAZyme
Location: 123548 - 124357 (+)
Gene ID: HRGMv2_2957_5_108
Type: CAZyme
Location: 124354 - 125049 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
CAG-390
→
Species
CAG-390 sp900753295

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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