Cluster: HRGMv2_2957_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2957
- CGC Family ID: CGCFAM_01785
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2957_5 | HRGMv2_2957_5_35 | 38352 | 41000 | + | GT51 |
| NULL(UNKNOWN) | HRGMv2_2957_5 | HRGMv2_2957_5_36 | 41135 | 41629 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2957_5 | HRGMv2_2957_5_37 | 41738 | 42787 | - | NAD_synthase | tRNA_Me_trans | QueC | tRNA_Me_trans_C | tRNA_Me_trans_M |
| TC | HRGMv2_2957_5 | HRGMv2_2957_5_38 | 42983 | 45754 | + | 3.A.5.1.1 |
Gene ID: HRGMv2_2957_5_35
Type: CAZyme
Location: 38352 - 41000 (+)
Type: CAZyme
Location: 38352 - 41000 (+)
Gene ID: HRGMv2_2957_5_36
Type:
Location: 41135 - 41629 (+)
Type:
Location: 41135 - 41629 (+)
Gene ID: HRGMv2_2957_5_37
Type: pfam
Location: 41738 - 42787 (-)
Type: pfam
Location: 41738 - 42787 (-)
Gene ID: HRGMv2_2957_5_38
Type: TC
Location: 42983 - 45754 (+)
Type: TC
Location: 42983 - 45754 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-390
Species
CAG-390 sp900753295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.