Cluster: HRGMv2_2952_CGC6
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2952
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2952_2 | HRGMv2_2952_2_78 | 101318 | 102451 | + | GH154 |
| CAZyme | HRGMv2_2952_2 | HRGMv2_2952_2_79 | 102470 | 103399 | + | GH43_26 |
| STP | HRGMv2_2952_2 | HRGMv2_2952_2_80 | 103544 | 104095 | + | Sigma70_r2 | Sigma70_r4_2 |
| NULL(UNKNOWN) | HRGMv2_2952_2 | HRGMv2_2952_2_81 | 104073 | 104666 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2952_2 | HRGMv2_2952_2_82 | 104734 | 106239 | + | 1.A.13.2.3 |
| CAZyme | HRGMv2_2952_2 | HRGMv2_2952_2_83 | 106320 | 107903 | - | GH32 |
| TC | HRGMv2_2952_2 | HRGMv2_2952_2_84 | 107927 | 108850 | - | 3.A.1.1.36 |
| TC | HRGMv2_2952_2 | HRGMv2_2952_2_85 | 108867 | 109790 | - | 3.A.1.1.11 |
| pfam | HRGMv2_2952_2 | HRGMv2_2952_2_86 | 109809 | 112367 | - | DUF5696 |
| STP | HRGMv2_2952_2 | HRGMv2_2952_2_87 | 112381 | 114459 | - | TPR_1 |
| TC | HRGMv2_2952_2 | HRGMv2_2952_2_88 | 114476 | 115357 | - | 3.A.1.1.39 |
| TC | HRGMv2_2952_2 | HRGMv2_2952_2_89 | 115439 | 116380 | - | 3.A.1.1.11 |
Gene ID: HRGMv2_2952_2_78
Type: CAZyme
Location: 101318 - 102451 (+)
Type: CAZyme
Location: 101318 - 102451 (+)
Gene ID: HRGMv2_2952_2_79
Type: CAZyme
Location: 102470 - 103399 (+)
Type: CAZyme
Location: 102470 - 103399 (+)
Gene ID: HRGMv2_2952_2_80
Type: STP
Location: 103544 - 104095 (+)
Type: STP
Location: 103544 - 104095 (+)
Gene ID: HRGMv2_2952_2_81
Type:
Location: 104073 - 104666 (+)
Type:
Location: 104073 - 104666 (+)
Gene ID: HRGMv2_2952_2_82
Type: TC
Location: 104734 - 106239 (+)
Type: TC
Location: 104734 - 106239 (+)
Gene ID: HRGMv2_2952_2_83
Type: CAZyme
Location: 106320 - 107903 (-)
Type: CAZyme
Location: 106320 - 107903 (-)
Gene ID: HRGMv2_2952_2_84
Type: TC
Location: 107927 - 108850 (-)
Type: TC
Location: 107927 - 108850 (-)
Gene ID: HRGMv2_2952_2_85
Type: TC
Location: 108867 - 109790 (-)
Type: TC
Location: 108867 - 109790 (-)
Gene ID: HRGMv2_2952_2_86
Type: pfam
Location: 109809 - 112367 (-)
Type: pfam
Location: 109809 - 112367 (-)
Gene ID: HRGMv2_2952_2_87
Type: STP
Location: 112381 - 114459 (-)
Type: STP
Location: 112381 - 114459 (-)
Gene ID: HRGMv2_2952_2_88
Type: TC
Location: 114476 - 115357 (-)
Type: TC
Location: 114476 - 115357 (-)
Gene ID: HRGMv2_2952_2_89
Type: TC
Location: 115439 - 116380 (-)
Type: TC
Location: 115439 - 116380 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1623
Species
UMGS1623 sp902492895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.