Cluster: HRGMv2_2952_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2952
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2952_2 | HRGMv2_2952_2_25 | 31335 | 32138 | - | 3.A.1.5.2 |
| TF | HRGMv2_2952_2 | HRGMv2_2952_2_26 | 32392 | 33114 | + | GntR |
| TF | HRGMv2_2952_2 | HRGMv2_2952_2_27 | 33141 | 33959 | + | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_2952_2 | HRGMv2_2952_2_28 | 34110 | 37178 | + | CE20 |
| NULL(UNKNOWN) | HRGMv2_2952_2 | HRGMv2_2952_2_29 | 37545 | 37856 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2952_2 | HRGMv2_2952_2_30 | 37895 | 38935 | + | vATP-synt_AC39 |
| TC | HRGMv2_2952_2 | HRGMv2_2952_2_31 | 38953 | 40896 | + | 3.A.2.3.3 |
Gene ID: HRGMv2_2952_2_25
Type: TC
Location: 31335 - 32138 (-)
Type: TC
Location: 31335 - 32138 (-)
Gene ID: HRGMv2_2952_2_26
Type: TF
Location: 32392 - 33114 (+)
Type: TF
Location: 32392 - 33114 (+)
Gene ID: HRGMv2_2952_2_27
Type: TF
Location: 33141 - 33959 (+)
Type: TF
Location: 33141 - 33959 (+)
Gene ID: HRGMv2_2952_2_28
Type: CAZyme
Location: 34110 - 37178 (+)
Type: CAZyme
Location: 34110 - 37178 (+)
Gene ID: HRGMv2_2952_2_29
Type:
Location: 37545 - 37856 (+)
Type:
Location: 37545 - 37856 (+)
Gene ID: HRGMv2_2952_2_30
Type: pfam
Location: 37895 - 38935 (+)
Type: pfam
Location: 37895 - 38935 (+)
Gene ID: HRGMv2_2952_2_31
Type: TC
Location: 38953 - 40896 (+)
Type: TC
Location: 38953 - 40896 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1623
Species
UMGS1623 sp902492895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.