Cluster: HRGMv2_2952_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2952
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2952_27 | HRGMv2_2952_27_18 | 13636 | 14670 | - | CE4 |
| pfam | HRGMv2_2952_27 | HRGMv2_2952_27_19 | 14838 | 15695 | + | DegV |
| TC | HRGMv2_2952_27 | HRGMv2_2952_27_20 | 15849 | 17252 | - | 2.A.66.1.33 |
| pfam | HRGMv2_2952_27 | HRGMv2_2952_27_21 | 17529 | 18530 | - | NAD_Gly3P_dh_N | ApbA | NAD_Gly3P_dh_C | GPD_NAD_C_bact |
| TC | HRGMv2_2952_27 | HRGMv2_2952_27_22 | 18600 | 19310 | - | 9.B.31.1.1 |
Gene ID: HRGMv2_2952_27_18
Type: CAZyme
Location: 13636 - 14670 (-)
Type: CAZyme
Location: 13636 - 14670 (-)
Gene ID: HRGMv2_2952_27_19
Type: pfam
Location: 14838 - 15695 (+)
Type: pfam
Location: 14838 - 15695 (+)
Gene ID: HRGMv2_2952_27_20
Type: TC
Location: 15849 - 17252 (-)
Type: TC
Location: 15849 - 17252 (-)
Gene ID: HRGMv2_2952_27_21
Type: pfam
Location: 17529 - 18530 (-)
Type: pfam
Location: 17529 - 18530 (-)
Gene ID: HRGMv2_2952_27_22
Type: TC
Location: 18600 - 19310 (-)
Type: TC
Location: 18600 - 19310 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1623
Species
UMGS1623 sp902492895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.