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Cluster: HRGMv2_2952_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2952_25 HRGMv2_2952_25_2 925 2835 - GH163
STP HRGMv2_2952_25 HRGMv2_2952_25_3 2862 4169 - SBP_bac_1
TC HRGMv2_2952_25 HRGMv2_2952_25_4 4219 5241 - 3.A.1.1.11
NULL(UNKNOWN) HRGMv2_2952_25 HRGMv2_2952_25_5 5339 6895 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2952_25 HRGMv2_2952_25_6 6976 8010 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2952_25 HRGMv2_2952_25_7 8085 8999 - 3.A.1.1.25
pfam HRGMv2_2952_25 HRGMv2_2952_25_8 8996 11215 - DUF5696
pfam HRGMv2_2952_25 HRGMv2_2952_25_9 11437 13494 - NHL | Yip1
TC HRGMv2_2952_25 HRGMv2_2952_25_10 13591 14433 - 3.A.1.1.39
Gene ID: HRGMv2_2952_25_2
Type: CAZyme
Location: 925 - 2835 (-)
Gene ID: HRGMv2_2952_25_3
Type: STP
Location: 2862 - 4169 (-)
Gene ID: HRGMv2_2952_25_4
Type: TC
Location: 4219 - 5241 (-)
Gene ID: HRGMv2_2952_25_5
Type:
Location: 5339 - 6895 (-)
Gene ID: HRGMv2_2952_25_6
Type:
Location: 6976 - 8010 (-)
Gene ID: HRGMv2_2952_25_7
Type: TC
Location: 8085 - 8999 (-)
Gene ID: HRGMv2_2952_25_8
Type: pfam
Location: 8996 - 11215 (-)
Gene ID: HRGMv2_2952_25_9
Type: pfam
Location: 11437 - 13494 (-)
Gene ID: HRGMv2_2952_25_10
Type: TC
Location: 13591 - 14433 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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