Cluster: HRGMv2_2952_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2952
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2952_16 | HRGMv2_2952_16_43 | 52411 | 54156 | + | 3.A.1.135.5 |
| TC | HRGMv2_2952_16 | HRGMv2_2952_16_44 | 54146 | 56038 | + | 3.A.1.135.5 |
| STP | HRGMv2_2952_16 | HRGMv2_2952_16_45 | 56365 | 57936 | + | HD |
| pfam | HRGMv2_2952_16 | HRGMv2_2952_16_46 | 58033 | 58803 | + | Metallophos | YmdB |
| CAZyme | HRGMv2_2952_16 | HRGMv2_2952_16_47 | 58941 | 59897 | + | GT2 |
Gene ID: HRGMv2_2952_16_43
Type: TC
Location: 52411 - 54156 (+)
Type: TC
Location: 52411 - 54156 (+)
Gene ID: HRGMv2_2952_16_44
Type: TC
Location: 54146 - 56038 (+)
Type: TC
Location: 54146 - 56038 (+)
Gene ID: HRGMv2_2952_16_45
Type: STP
Location: 56365 - 57936 (+)
Type: STP
Location: 56365 - 57936 (+)
Gene ID: HRGMv2_2952_16_46
Type: pfam
Location: 58033 - 58803 (+)
Type: pfam
Location: 58033 - 58803 (+)
Gene ID: HRGMv2_2952_16_47
Type: CAZyme
Location: 58941 - 59897 (+)
Type: CAZyme
Location: 58941 - 59897 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1623
Species
UMGS1623 sp902492895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.