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Cluster: HRGMv2_2952_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2952_1 HRGMv2_2952_1_143 174352 176229 - GH163
CAZyme HRGMv2_2952_1 HRGMv2_2952_1_144 176265 177932 - GH163
STP HRGMv2_2952_1 HRGMv2_2952_1_145 177961 179226 - SBP_bac_1
TC HRGMv2_2952_1 HRGMv2_2952_1_146 179267 180283 - 3.A.1.1.11
NULL(UNKNOWN) HRGMv2_2952_1 HRGMv2_2952_1_147 180377 182896 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2952_1 HRGMv2_2952_1_148 182965 184059 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2952_1 HRGMv2_2952_1_149 184458 185363 - 3.A.1.1.41
pfam HRGMv2_2952_1 HRGMv2_2952_1_150 185353 187614 - DUF5696
pfam HRGMv2_2952_1 HRGMv2_2952_1_151 187630 189684 - NHL | Yip1
TC HRGMv2_2952_1 HRGMv2_2952_1_152 189715 190572 - 3.A.1.1.39
Gene ID: HRGMv2_2952_1_143
Type: CAZyme
Location: 174352 - 176229 (-)
Gene ID: HRGMv2_2952_1_144
Type: CAZyme
Location: 176265 - 177932 (-)
Gene ID: HRGMv2_2952_1_145
Type: STP
Location: 177961 - 179226 (-)
Gene ID: HRGMv2_2952_1_146
Type: TC
Location: 179267 - 180283 (-)
Gene ID: HRGMv2_2952_1_147
Type:
Location: 180377 - 182896 (-)
Gene ID: HRGMv2_2952_1_148
Type:
Location: 182965 - 184059 (-)
Gene ID: HRGMv2_2952_1_149
Type: TC
Location: 184458 - 185363 (-)
Gene ID: HRGMv2_2952_1_150
Type: pfam
Location: 185353 - 187614 (-)
Gene ID: HRGMv2_2952_1_151
Type: pfam
Location: 187630 - 189684 (-)
Gene ID: HRGMv2_2952_1_152
Type: TC
Location: 189715 - 190572 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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