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Cluster: HRGMv2_2952_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2952_10 HRGMv2_2952_10_70 70649 71611 - 3.A.1.1.4
TC HRGMv2_2952_10 HRGMv2_2952_10_71 71645 72544 - 3.A.1.1.28
pfam HRGMv2_2952_10 HRGMv2_2952_10_72 72541 74823 - DUF5696
pfam HRGMv2_2952_10 HRGMv2_2952_10_73 74852 76951 - Yip1
TC HRGMv2_2952_10 HRGMv2_2952_10_74 76986 77855 - 3.A.1.1.39
TC HRGMv2_2952_10 HRGMv2_2952_10_75 77944 78912 - 3.A.1.1.29
STP HRGMv2_2952_10 HRGMv2_2952_10_76 78899 81772 - SBP_bac_1
CAZyme HRGMv2_2952_10 HRGMv2_2952_10_77 81769 84030 - GH2
Gene ID: HRGMv2_2952_10_70
Type: TC
Location: 70649 - 71611 (-)
Gene ID: HRGMv2_2952_10_71
Type: TC
Location: 71645 - 72544 (-)
Gene ID: HRGMv2_2952_10_72
Type: pfam
Location: 72541 - 74823 (-)
Gene ID: HRGMv2_2952_10_73
Type: pfam
Location: 74852 - 76951 (-)
Gene ID: HRGMv2_2952_10_74
Type: TC
Location: 76986 - 77855 (-)
Gene ID: HRGMv2_2952_10_75
Type: TC
Location: 77944 - 78912 (-)
Gene ID: HRGMv2_2952_10_76
Type: STP
Location: 78899 - 81772 (-)
Gene ID: HRGMv2_2952_10_77
Type: CAZyme
Location: 81769 - 84030 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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