Cluster: HRGMv2_2952_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2952
- CGC Family ID: CGCFAM_00976
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2952_9 | HRGMv2_2952_9_56 | 70209 | 71093 | - | 3.A.1.1.20 |
| TC | HRGMv2_2952_9 | HRGMv2_2952_9_57 | 71086 | 71976 | - | 3.A.1.1.41 |
| STP | HRGMv2_2952_9 | HRGMv2_2952_9_58 | 71973 | 74807 | - | SBP_bac_1 |
| STP | HRGMv2_2952_9 | HRGMv2_2952_9_59 | 74884 | 76386 | - | SBP_bac_1 |
| CAZyme | HRGMv2_2952_9 | HRGMv2_2952_9_60 | 76391 | 78700 | - | GH2 |
Gene ID: HRGMv2_2952_9_56
Type: TC
Location: 70209 - 71093 (-)
Type: TC
Location: 70209 - 71093 (-)
Gene ID: HRGMv2_2952_9_57
Type: TC
Location: 71086 - 71976 (-)
Type: TC
Location: 71086 - 71976 (-)
Gene ID: HRGMv2_2952_9_58
Type: STP
Location: 71973 - 74807 (-)
Type: STP
Location: 71973 - 74807 (-)
Gene ID: HRGMv2_2952_9_59
Type: STP
Location: 74884 - 76386 (-)
Type: STP
Location: 74884 - 76386 (-)
Gene ID: HRGMv2_2952_9_60
Type: CAZyme
Location: 76391 - 78700 (-)
Type: CAZyme
Location: 76391 - 78700 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1623
Species
UMGS1623 sp902492895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.