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Cluster: HRGMv2_2952_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2952_9 HRGMv2_2952_9_45 54294 55925 - CE20
NULL(UNKNOWN) HRGMv2_2952_9 HRGMv2_2952_9_46 55928 56989 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2952_9 HRGMv2_2952_9_47 57026 58594 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2952_9 HRGMv2_2952_9_48 58725 60431 - GH30_4
CAZyme HRGMv2_2952_9 HRGMv2_2952_9_49 60499 61977 - GH30_4
CAZyme HRGMv2_2952_9 HRGMv2_2952_9_50 62055 63449 - GH30_4
TC HRGMv2_2952_9 HRGMv2_2952_9_51 63479 64495 - 3.A.1.1.45
TC HRGMv2_2952_9 HRGMv2_2952_9_52 64495 65448 - 3.A.1.1.19
Gene ID: HRGMv2_2952_9_45
Type: CAZyme
Location: 54294 - 55925 (-)
Gene ID: HRGMv2_2952_9_46
Type:
Location: 55928 - 56989 (-)
Gene ID: HRGMv2_2952_9_47
Type:
Location: 57026 - 58594 (-)
Gene ID: HRGMv2_2952_9_48
Type: CAZyme
Location: 58725 - 60431 (-)
Gene ID: HRGMv2_2952_9_49
Type: CAZyme
Location: 60499 - 61977 (-)
Gene ID: HRGMv2_2952_9_50
Type: CAZyme
Location: 62055 - 63449 (-)
Gene ID: HRGMv2_2952_9_51
Type: TC
Location: 63479 - 64495 (-)
Gene ID: HRGMv2_2952_9_52
Type: TC
Location: 64495 - 65448 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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