Cluster: HRGMv2_2952_CGC1
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_2952
- CGC Family ID: CGCFAM_01117
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2952_1 | HRGMv2_2952_1_103 | 115245 | 116753 | - | GH51_1 |
| NULL(UNKNOWN) | HRGMv2_2952_1 | HRGMv2_2952_1_104 | 116916 | 118664 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2952_1 | HRGMv2_2952_1_105 | 118753 | 121686 | - | GH43_5 |
| CAZyme | HRGMv2_2952_1 | HRGMv2_2952_1_106 | 121735 | 123381 | - | GH43_5 |
| STP | HRGMv2_2952_1 | HRGMv2_2952_1_107 | 123400 | 124887 | - | SBP_bac_1 |
| TC | HRGMv2_2952_1 | HRGMv2_2952_1_108 | 124951 | 125937 | - | 3.A.1.1.4 |
| TC | HRGMv2_2952_1 | HRGMv2_2952_1_109 | 125948 | 126871 | - | 3.A.1.1.11 |
| pfam | HRGMv2_2952_1 | HRGMv2_2952_1_110 | 126850 | 129078 | - | DUF5696 |
| NULL(UNKNOWN) | HRGMv2_2952_1 | HRGMv2_2952_1_111 | 129065 | 131107 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2952_1 | HRGMv2_2952_1_112 | 131154 | 132023 | - | 3.A.1.1.39 |
| TC | HRGMv2_2952_1 | HRGMv2_2952_1_113 | 132065 | 132946 | - | 3.A.1.1.4 |
| STP | HRGMv2_2952_1 | HRGMv2_2952_1_114 | 132952 | 135936 | - | SBP_bac_1 |
| CAZyme | HRGMv2_2952_1 | HRGMv2_2952_1_115 | 135965 | 137737 | - | GH2 |
Gene ID: HRGMv2_2952_1_103
Type: CAZyme
Location: 115245 - 116753 (-)
Type: CAZyme
Location: 115245 - 116753 (-)
Gene ID: HRGMv2_2952_1_104
Type:
Location: 116916 - 118664 (-)
Type:
Location: 116916 - 118664 (-)
Gene ID: HRGMv2_2952_1_105
Type: CAZyme
Location: 118753 - 121686 (-)
Type: CAZyme
Location: 118753 - 121686 (-)
Gene ID: HRGMv2_2952_1_106
Type: CAZyme
Location: 121735 - 123381 (-)
Type: CAZyme
Location: 121735 - 123381 (-)
Gene ID: HRGMv2_2952_1_107
Type: STP
Location: 123400 - 124887 (-)
Type: STP
Location: 123400 - 124887 (-)
Gene ID: HRGMv2_2952_1_108
Type: TC
Location: 124951 - 125937 (-)
Type: TC
Location: 124951 - 125937 (-)
Gene ID: HRGMv2_2952_1_109
Type: TC
Location: 125948 - 126871 (-)
Type: TC
Location: 125948 - 126871 (-)
Gene ID: HRGMv2_2952_1_110
Type: pfam
Location: 126850 - 129078 (-)
Type: pfam
Location: 126850 - 129078 (-)
Gene ID: HRGMv2_2952_1_111
Type:
Location: 129065 - 131107 (-)
Type:
Location: 129065 - 131107 (-)
Gene ID: HRGMv2_2952_1_112
Type: TC
Location: 131154 - 132023 (-)
Type: TC
Location: 131154 - 132023 (-)
Gene ID: HRGMv2_2952_1_113
Type: TC
Location: 132065 - 132946 (-)
Type: TC
Location: 132065 - 132946 (-)
Gene ID: HRGMv2_2952_1_114
Type: STP
Location: 132952 - 135936 (-)
Type: STP
Location: 132952 - 135936 (-)
Gene ID: HRGMv2_2952_1_115
Type: CAZyme
Location: 135965 - 137737 (-)
Type: CAZyme
Location: 135965 - 137737 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1623
Species
UMGS1623 sp902492895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.