dbCAN Logo

Cluster: HRGMv2_2951_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2951_5 HRGMv2_2951_5_121 114000 115205 - GT4
CAZyme HRGMv2_2951_5 HRGMv2_2951_5_122 115837 116964 - GT4
CAZyme HRGMv2_2951_5 HRGMv2_2951_5_123 117683 118948 - GT4
TC HRGMv2_2951_5 HRGMv2_2951_5_124 118985 119671 - 9.B.18.1.3
pfam HRGMv2_2951_5 HRGMv2_2951_5_125 119675 120892 - Aminotran_1_2 | DegT_DnrJ_EryC1
NULL(UNKNOWN) HRGMv2_2951_5 HRGMv2_2951_5_126 120918 122369 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2951_5 HRGMv2_2951_5_127 122411 124297 - 9.B.18.2.1
TC HRGMv2_2951_5 HRGMv2_2951_5_128 125121 125564 - 2.A.79.1.7
TC HRGMv2_2951_5 HRGMv2_2951_5_129 125584 126432 - 2.A.79.1.5
Gene ID: HRGMv2_2951_5_121
Type: CAZyme
Location: 114000 - 115205 (-)
Gene ID: HRGMv2_2951_5_122
Type: CAZyme
Location: 115837 - 116964 (-)
Gene ID: HRGMv2_2951_5_123
Type: CAZyme
Location: 117683 - 118948 (-)
Gene ID: HRGMv2_2951_5_124
Type: TC
Location: 118985 - 119671 (-)
Gene ID: HRGMv2_2951_5_125
Type: pfam
Location: 119675 - 120892 (-)
Gene ID: HRGMv2_2951_5_126
Type:
Location: 120918 - 122369 (-)
Gene ID: HRGMv2_2951_5_127
Type: TC
Location: 122411 - 124297 (-)
Gene ID: HRGMv2_2951_5_128
Type: TC
Location: 125121 - 125564 (-)
Gene ID: HRGMv2_2951_5_129
Type: TC
Location: 125584 - 126432 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List