Cluster: HRGMv2_2951_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2951
- CGC Family ID: CGCFAM_02064
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2951_33 | HRGMv2_2951_33_106 | 102547 | 103305 | - | 3.A.1.3.13 |
| TC | HRGMv2_2951_33 | HRGMv2_2951_33_107 | 103327 | 103989 | - | 3.A.1.3.10 |
| STP | HRGMv2_2951_33 | HRGMv2_2951_33_108 | 104156 | 104953 | - | SBP_bac_3 |
| pfam | HRGMv2_2951_33 | HRGMv2_2951_33_109 | 105174 | 106001 | - | VCA0040-like |
| TC | HRGMv2_2951_33 | HRGMv2_2951_33_110 | 106095 | 107165 | - | 4.D.2.1.7 |
| CAZyme | HRGMv2_2951_33 | HRGMv2_2951_33_111 | 107162 | 108286 | - | GT4 |
Gene ID: HRGMv2_2951_33_106
Type: TC
Location: 102547 - 103305 (-)
Type: TC
Location: 102547 - 103305 (-)
Gene ID: HRGMv2_2951_33_107
Type: TC
Location: 103327 - 103989 (-)
Type: TC
Location: 103327 - 103989 (-)
Gene ID: HRGMv2_2951_33_108
Type: STP
Location: 104156 - 104953 (-)
Type: STP
Location: 104156 - 104953 (-)
Gene ID: HRGMv2_2951_33_109
Type: pfam
Location: 105174 - 106001 (-)
Type: pfam
Location: 105174 - 106001 (-)
Gene ID: HRGMv2_2951_33_110
Type: TC
Location: 106095 - 107165 (-)
Type: TC
Location: 106095 - 107165 (-)
Gene ID: HRGMv2_2951_33_111
Type: CAZyme
Location: 107162 - 108286 (-)
Type: CAZyme
Location: 107162 - 108286 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Negativibacillus
Species
Negativibacillus faecipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.