Cluster: HRGMv2_2951_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2951
- CGC Family ID: CGCFAM_10256
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2951_31 | HRGMv2_2951_31_76 | 82694 | 84013 | + | GH29 |
| pfam | HRGMv2_2951_31 | HRGMv2_2951_31_77 | 85502 | 87088 | + | HMGL-like | LeuA_dimer | HCS_D2 |
| CAZyme | HRGMv2_2951_31 | HRGMv2_2951_31_78 | 87604 | 89304 | - | GH5_36 |
| TF | HRGMv2_2951_31 | HRGMv2_2951_31_79 | 89392 | 89601 | - | HTH_3 |
| NULL(UNKNOWN) | HRGMv2_2951_31 | HRGMv2_2951_31_80 | 89698 | 90108 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2951_31 | HRGMv2_2951_31_81 | 90262 | 92892 | - | 4.A.2.1.17 |
Gene ID: HRGMv2_2951_31_76
Type: CAZyme
Location: 82694 - 84013 (+)
Type: CAZyme
Location: 82694 - 84013 (+)
Gene ID: HRGMv2_2951_31_77
Type: pfam
Location: 85502 - 87088 (+)
Type: pfam
Location: 85502 - 87088 (+)
Gene ID: HRGMv2_2951_31_78
Type: CAZyme
Location: 87604 - 89304 (-)
Type: CAZyme
Location: 87604 - 89304 (-)
Gene ID: HRGMv2_2951_31_79
Type: TF
Location: 89392 - 89601 (-)
Type: TF
Location: 89392 - 89601 (-)
Gene ID: HRGMv2_2951_31_80
Type:
Location: 89698 - 90108 (+)
Type:
Location: 89698 - 90108 (+)
Gene ID: HRGMv2_2951_31_81
Type: TC
Location: 90262 - 92892 (-)
Type: TC
Location: 90262 - 92892 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Negativibacillus
Species
Negativibacillus faecipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.