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Cluster: HRGMv2_2951_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2951_27 HRGMv2_2951_27_151 170398 170967 + 2.A.107.1.2
pfam HRGMv2_2951_27 HRGMv2_2951_27_152 171075 171596 - Macro
TF HRGMv2_2951_27 HRGMv2_2951_27_153 171822 172469 - HTH_3
TC HRGMv2_2951_27 HRGMv2_2951_27_154 172670 174025 - 2.A.66.1.45
TC HRGMv2_2951_27 HRGMv2_2951_27_155 174897 176744 - 3.A.1.106.3
TC HRGMv2_2951_27 HRGMv2_2951_27_156 176750 178621 - 3.A.1.106.14
pfam HRGMv2_2951_27 HRGMv2_2951_27_157 179054 179332 - Se_S_carrier
CAZyme HRGMv2_2951_27 HRGMv2_2951_27_158 179356 181638 - GT35
CAZyme HRGMv2_2951_27 HRGMv2_2951_27_159 181642 183183 - GH77
pfam HRGMv2_2951_27 HRGMv2_2951_27_160 183460 184479 + DUF4349
TC HRGMv2_2951_27 HRGMv2_2951_27_161 184668 185750 + 1.A.23.4.1
Gene ID: HRGMv2_2951_27_151
Type: TC
Location: 170398 - 170967 (+)
Gene ID: HRGMv2_2951_27_152
Type: pfam
Location: 171075 - 171596 (-)
Gene ID: HRGMv2_2951_27_153
Type: TF
Location: 171822 - 172469 (-)
Gene ID: HRGMv2_2951_27_154
Type: TC
Location: 172670 - 174025 (-)
Gene ID: HRGMv2_2951_27_155
Type: TC
Location: 174897 - 176744 (-)
Gene ID: HRGMv2_2951_27_156
Type: TC
Location: 176750 - 178621 (-)
Gene ID: HRGMv2_2951_27_157
Type: pfam
Location: 179054 - 179332 (-)
Gene ID: HRGMv2_2951_27_158
Type: CAZyme
Location: 179356 - 181638 (-)
Gene ID: HRGMv2_2951_27_159
Type: CAZyme
Location: 181642 - 183183 (-)
Gene ID: HRGMv2_2951_27_160
Type: pfam
Location: 183460 - 184479 (+)
Gene ID: HRGMv2_2951_27_161
Type: TC
Location: 184668 - 185750 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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