Cluster: HRGMv2_2950_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2950
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2950_22 | HRGMv2_2950_22_21 | 26759 | 27622 | - | 3.A.1.1.34 |
| TC | HRGMv2_2950_22 | HRGMv2_2950_22_22 | 27626 | 28504 | - | 3.A.1.1.34 |
| pfam | HRGMv2_2950_22 | HRGMv2_2950_22_23 | 28667 | 29707 | - | ROK |
| CAZyme | HRGMv2_2950_22 | HRGMv2_2950_22_24 | 29697 | 32129 | - | GH38 |
| CAZyme | HRGMv2_2950_22 | HRGMv2_2950_22_25 | 32593 | 34716 | - | GH36 |
| CAZyme | HRGMv2_2950_22 | HRGMv2_2950_22_26 | 34849 | 36294 | + | GH13_18 |
Gene ID: HRGMv2_2950_22_21
Type: TC
Location: 26759 - 27622 (-)
Type: TC
Location: 26759 - 27622 (-)
Gene ID: HRGMv2_2950_22_22
Type: TC
Location: 27626 - 28504 (-)
Type: TC
Location: 27626 - 28504 (-)
Gene ID: HRGMv2_2950_22_23
Type: pfam
Location: 28667 - 29707 (-)
Type: pfam
Location: 28667 - 29707 (-)
Gene ID: HRGMv2_2950_22_24
Type: CAZyme
Location: 29697 - 32129 (-)
Type: CAZyme
Location: 29697 - 32129 (-)
Gene ID: HRGMv2_2950_22_25
Type: CAZyme
Location: 32593 - 34716 (-)
Type: CAZyme
Location: 32593 - 34716 (-)
Gene ID: HRGMv2_2950_22_26
Type: CAZyme
Location: 34849 - 36294 (+)
Type: CAZyme
Location: 34849 - 36294 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caccousia
Species
Caccousia sp900752115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.