Cluster: HRGMv2_2950_CGC42
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2950
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2950_70 | HRGMv2_2950_70_10 | 7982 | 10297 | - | GH25 |
| pfam | HRGMv2_2950_70 | HRGMv2_2950_70_11 | 10733 | 11590 | + | Cu-oxidase_4 |
| pfam | HRGMv2_2950_70 | HRGMv2_2950_70_12 | 11580 | 12473 | + | Radical_SAM |
| TC | HRGMv2_2950_70 | HRGMv2_2950_70_13 | 12608 | 13291 | + | 1.C.113.1.1 |
Gene ID: HRGMv2_2950_70_10
Type: CAZyme
Location: 7982 - 10297 (-)
Type: CAZyme
Location: 7982 - 10297 (-)
Gene ID: HRGMv2_2950_70_11
Type: pfam
Location: 10733 - 11590 (+)
Type: pfam
Location: 10733 - 11590 (+)
Gene ID: HRGMv2_2950_70_12
Type: pfam
Location: 11580 - 12473 (+)
Type: pfam
Location: 11580 - 12473 (+)
Gene ID: HRGMv2_2950_70_13
Type: TC
Location: 12608 - 13291 (+)
Type: TC
Location: 12608 - 13291 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caccousia
Species
Caccousia sp900752115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.