Cluster: HRGMv2_2950_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2950
- CGC Family ID: CGCFAM_10255
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2950_9 | HRGMv2_2950_9_6 | 5596 | 7239 | - | 2.A.58.2.2 |
| CAZyme | HRGMv2_2950_9 | HRGMv2_2950_9_7 | 7759 | 9267 | + | GH32 |
| pfam | HRGMv2_2950_9 | HRGMv2_2950_9_8 | 9411 | 9722 | + | Thioredoxin | Thioredoxin_2 | Thioredoxin_3 | TraF | Thioredoxin_9 |
| TC | HRGMv2_2950_9 | HRGMv2_2950_9_9 | 9902 | 10600 | - | 3.A.1.121.4 |
Gene ID: HRGMv2_2950_9_6
Type: TC
Location: 5596 - 7239 (-)
Type: TC
Location: 5596 - 7239 (-)
Gene ID: HRGMv2_2950_9_7
Type: CAZyme
Location: 7759 - 9267 (+)
Type: CAZyme
Location: 7759 - 9267 (+)
Gene ID: HRGMv2_2950_9_8
Type: pfam
Location: 9411 - 9722 (+)
Type: pfam
Location: 9411 - 9722 (+)
Gene ID: HRGMv2_2950_9_9
Type: TC
Location: 9902 - 10600 (-)
Type: TC
Location: 9902 - 10600 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caccousia
Species
Caccousia sp900752115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.