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Cluster: HRGMv2_2950_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2950_63 HRGMv2_2950_63_17 12984 14378 + 2.A.50.2.1
pfam HRGMv2_2950_63 HRGMv2_2950_63_18 14440 15630 + DHHW | ALGX
STP HRGMv2_2950_63 HRGMv2_2950_63_19 15771 16028 + PTS-HPr
TC HRGMv2_2950_63 HRGMv2_2950_63_20 16043 17653 + 8.A.7.1.1
TC HRGMv2_2950_63 HRGMv2_2950_63_21 17746 19140 + 9.B.18.1.1
pfam HRGMv2_2950_63 HRGMv2_2950_63_22 19212 20420 + EpsG
CAZyme HRGMv2_2950_63 HRGMv2_2950_63_23 20434 21564 + GT4
TC HRGMv2_2950_63 HRGMv2_2950_63_24 21910 23067 + 3.A.1.4.10
TC HRGMv2_2950_63 HRGMv2_2950_63_25 23223 24104 + 3.A.1.4.10
TC HRGMv2_2950_63 HRGMv2_2950_63_26 24121 25170 + 3.A.1.4.8
TC HRGMv2_2950_63 HRGMv2_2950_63_27 25174 25983 + 3.A.1.4.10
TC HRGMv2_2950_63 HRGMv2_2950_63_28 25985 26710 + 3.A.1.4.10
Gene ID: HRGMv2_2950_63_17
Type: TC
Location: 12984 - 14378 (+)
Gene ID: HRGMv2_2950_63_18
Type: pfam
Location: 14440 - 15630 (+)
Gene ID: HRGMv2_2950_63_19
Type: STP
Location: 15771 - 16028 (+)
Gene ID: HRGMv2_2950_63_20
Type: TC
Location: 16043 - 17653 (+)
Gene ID: HRGMv2_2950_63_21
Type: TC
Location: 17746 - 19140 (+)
Gene ID: HRGMv2_2950_63_22
Type: pfam
Location: 19212 - 20420 (+)
Gene ID: HRGMv2_2950_63_23
Type: CAZyme
Location: 20434 - 21564 (+)
Gene ID: HRGMv2_2950_63_24
Type: TC
Location: 21910 - 23067 (+)
Gene ID: HRGMv2_2950_63_25
Type: TC
Location: 23223 - 24104 (+)
Gene ID: HRGMv2_2950_63_26
Type: TC
Location: 24121 - 25170 (+)
Gene ID: HRGMv2_2950_63_27
Type: TC
Location: 25174 - 25983 (+)
Gene ID: HRGMv2_2950_63_28
Type: TC
Location: 25985 - 26710 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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