Cluster: HRGMv2_2950_CGC35
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2950
- CGC Family ID: CGCFAM_00026
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2950_58 | HRGMv2_2950_58_18 | 18922 | 19857 | + | 3.A.1.1.10 |
| TC | HRGMv2_2950_58 | HRGMv2_2950_58_19 | 19871 | 20782 | + | 3.A.1.1.29 |
| STP | HRGMv2_2950_58 | HRGMv2_2950_58_20 | 20830 | 22458 | + | SBP_bac_1 |
| pfam | HRGMv2_2950_58 | HRGMv2_2950_58_21 | 22767 | 23945 | + | DUF4185 |
| CAZyme | HRGMv2_2950_58 | HRGMv2_2950_58_22 | 24226 | 25284 | - | GH179 |
Gene ID: HRGMv2_2950_58_18
Type: TC
Location: 18922 - 19857 (+)
Type: TC
Location: 18922 - 19857 (+)
Gene ID: HRGMv2_2950_58_19
Type: TC
Location: 19871 - 20782 (+)
Type: TC
Location: 19871 - 20782 (+)
Gene ID: HRGMv2_2950_58_20
Type: STP
Location: 20830 - 22458 (+)
Type: STP
Location: 20830 - 22458 (+)
Gene ID: HRGMv2_2950_58_21
Type: pfam
Location: 22767 - 23945 (+)
Type: pfam
Location: 22767 - 23945 (+)
Gene ID: HRGMv2_2950_58_22
Type: CAZyme
Location: 24226 - 25284 (-)
Type: CAZyme
Location: 24226 - 25284 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caccousia
Species
Caccousia sp900752115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.