Cluster: HRGMv2_2950_CGC27
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2950
- CGC Family ID: CGCFAM_00870
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2950_46 | HRGMv2_2950_46_2 | 1315 | 2064 | + | 8.A.59.2.1 |
| TF | HRGMv2_2950_46 | HRGMv2_2950_46_3 | 2049 | 3590 | + | HTH_AraC |
| TC | HRGMv2_2950_46 | HRGMv2_2950_46_4 | 3776 | 5524 | + | 3.A.1.1.29 |
| TC | HRGMv2_2950_46 | HRGMv2_2950_46_5 | 5601 | 6509 | + | 3.A.1.1.29 |
| TC | HRGMv2_2950_46 | HRGMv2_2950_46_6 | 6523 | 7434 | + | 3.A.1.1.29 |
| TF | HRGMv2_2950_46 | HRGMv2_2950_46_7 | 7551 | 8495 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_2950_46 | HRGMv2_2950_46_8 | 8705 | 9865 | + | GH8 |
Gene ID: HRGMv2_2950_46_2
Type: TC
Location: 1315 - 2064 (+)
Type: TC
Location: 1315 - 2064 (+)
Gene ID: HRGMv2_2950_46_3
Type: TF
Location: 2049 - 3590 (+)
Type: TF
Location: 2049 - 3590 (+)
Gene ID: HRGMv2_2950_46_4
Type: TC
Location: 3776 - 5524 (+)
Type: TC
Location: 3776 - 5524 (+)
Gene ID: HRGMv2_2950_46_5
Type: TC
Location: 5601 - 6509 (+)
Type: TC
Location: 5601 - 6509 (+)
Gene ID: HRGMv2_2950_46_6
Type: TC
Location: 6523 - 7434 (+)
Type: TC
Location: 6523 - 7434 (+)
Gene ID: HRGMv2_2950_46_7
Type: TF
Location: 7551 - 8495 (-)
Type: TF
Location: 7551 - 8495 (-)
Gene ID: HRGMv2_2950_46_8
Type: CAZyme
Location: 8705 - 9865 (+)
Type: CAZyme
Location: 8705 - 9865 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caccousia
Species
Caccousia sp900752115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.