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Cluster: HRGMv2_2950_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2950_40 HRGMv2_2950_40_93 119343 121055 - 3.A.1.109.2
TF HRGMv2_2950_40 HRGMv2_2950_40_94 121042 122124 - HTH_3
TC HRGMv2_2950_40 HRGMv2_2950_40_95 122701 124107 - 2.A.66.1.33
CAZyme HRGMv2_2950_40 HRGMv2_2950_40_96 124530 126581 + CBM48 | GH13_9
pfam HRGMv2_2950_40 HRGMv2_2950_40_97 126640 127863 + NTP_transferase | Hexapep_GlmU
pfam HRGMv2_2950_40 HRGMv2_2950_40_98 127863 128978 + NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_2950_40 HRGMv2_2950_40_99 129039 130463 + GT5
pfam HRGMv2_2950_40 HRGMv2_2950_40_100 130729 131424 - CMD | CMD
STP HRGMv2_2950_40 HRGMv2_2950_40_101 131447 131977 - AraC_binding
TC HRGMv2_2950_40 HRGMv2_2950_40_102 132184 133065 - 3.A.1.1.9
TC HRGMv2_2950_40 HRGMv2_2950_40_103 133086 134012 - 3.A.1.1.9
TC HRGMv2_2950_40 HRGMv2_2950_40_104 134104 135813 - 3.A.1.1.9
TF HRGMv2_2950_40 HRGMv2_2950_40_105 136020 137531 + HTH_AraC | HTH_AraC
TC HRGMv2_2950_40 HRGMv2_2950_40_106 137599 139239 + 9.B.33.1.1
NULL(UNKNOWN) HRGMv2_2950_40 HRGMv2_2950_40_107 139395 139931 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2950_40 HRGMv2_2950_40_108 140248 141345 + GH172
Gene ID: HRGMv2_2950_40_93
Type: TC
Location: 119343 - 121055 (-)
Gene ID: HRGMv2_2950_40_94
Type: TF
Location: 121042 - 122124 (-)
Gene ID: HRGMv2_2950_40_95
Type: TC
Location: 122701 - 124107 (-)
Gene ID: HRGMv2_2950_40_96
Type: CAZyme
Location: 124530 - 126581 (+)
Gene ID: HRGMv2_2950_40_97
Type: pfam
Location: 126640 - 127863 (+)
Gene ID: HRGMv2_2950_40_98
Type: pfam
Location: 127863 - 128978 (+)
Gene ID: HRGMv2_2950_40_99
Type: CAZyme
Location: 129039 - 130463 (+)
Gene ID: HRGMv2_2950_40_100
Type: pfam
Location: 130729 - 131424 (-)
Gene ID: HRGMv2_2950_40_101
Type: STP
Location: 131447 - 131977 (-)
Gene ID: HRGMv2_2950_40_102
Type: TC
Location: 132184 - 133065 (-)
Gene ID: HRGMv2_2950_40_103
Type: TC
Location: 133086 - 134012 (-)
Gene ID: HRGMv2_2950_40_104
Type: TC
Location: 134104 - 135813 (-)
Gene ID: HRGMv2_2950_40_105
Type: TF
Location: 136020 - 137531 (+)
Gene ID: HRGMv2_2950_40_106
Type: TC
Location: 137599 - 139239 (+)
Gene ID: HRGMv2_2950_40_107
Type:
Location: 139395 - 139931 (-)
Gene ID: HRGMv2_2950_40_108
Type: CAZyme
Location: 140248 - 141345 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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