Cluster: HRGMv2_2950_CGC24
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2950
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2950_40 | HRGMv2_2950_40_70 | 87171 | 89345 | + | GH3 |
| TC | HRGMv2_2950_40 | HRGMv2_2950_40_71 | 89810 | 91177 | + | 3.A.1.1.21 |
| TC | HRGMv2_2950_40 | HRGMv2_2950_40_72 | 91382 | 92281 | + | 3.A.1.1.4 |
| TC | HRGMv2_2950_40 | HRGMv2_2950_40_73 | 92296 | 93132 | + | 3.A.1.1.47 |
| pfam | HRGMv2_2950_40 | HRGMv2_2950_40_74 | 93368 | 94255 | + | Lactamase_B_2 |
| CAZyme | HRGMv2_2950_40 | HRGMv2_2950_40_75 | 94272 | 96329 | + | GH13 |
Gene ID: HRGMv2_2950_40_70
Type: CAZyme
Location: 87171 - 89345 (+)
Type: CAZyme
Location: 87171 - 89345 (+)
Gene ID: HRGMv2_2950_40_71
Type: TC
Location: 89810 - 91177 (+)
Type: TC
Location: 89810 - 91177 (+)
Gene ID: HRGMv2_2950_40_72
Type: TC
Location: 91382 - 92281 (+)
Type: TC
Location: 91382 - 92281 (+)
Gene ID: HRGMv2_2950_40_73
Type: TC
Location: 92296 - 93132 (+)
Type: TC
Location: 92296 - 93132 (+)
Gene ID: HRGMv2_2950_40_74
Type: pfam
Location: 93368 - 94255 (+)
Type: pfam
Location: 93368 - 94255 (+)
Gene ID: HRGMv2_2950_40_75
Type: CAZyme
Location: 94272 - 96329 (+)
Type: CAZyme
Location: 94272 - 96329 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caccousia
Species
Caccousia sp900752115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.