Cluster: HRGMv2_2950_CGC23
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2950
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2950_40 | HRGMv2_2950_40_37 | 45070 | 45834 | - | 2.A.79.1.5 |
| pfam | HRGMv2_2950_40 | HRGMv2_2950_40_38 | 45848 | 46726 | - | Patatin | DUF6363 |
| TC | HRGMv2_2950_40 | HRGMv2_2950_40_39 | 46930 | 48705 | + | 3.A.1.120.6 |
| NULL(UNKNOWN) | HRGMv2_2950_40 | HRGMv2_2950_40_40 | 48747 | 49229 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_2950_40 | HRGMv2_2950_40_41 | 49733 | 50797 | + | HTH_3 |
| CAZyme | HRGMv2_2950_40 | HRGMv2_2950_40_42 | 50870 | 52921 | - | GH31_3 |
| CAZyme | HRGMv2_2950_40 | HRGMv2_2950_40_43 | 53346 | 55136 | - | GH123 |
Gene ID: HRGMv2_2950_40_37
Type: TC
Location: 45070 - 45834 (-)
Type: TC
Location: 45070 - 45834 (-)
Gene ID: HRGMv2_2950_40_38
Type: pfam
Location: 45848 - 46726 (-)
Type: pfam
Location: 45848 - 46726 (-)
Gene ID: HRGMv2_2950_40_39
Type: TC
Location: 46930 - 48705 (+)
Type: TC
Location: 46930 - 48705 (+)
Gene ID: HRGMv2_2950_40_40
Type:
Location: 48747 - 49229 (+)
Type:
Location: 48747 - 49229 (+)
Gene ID: HRGMv2_2950_40_41
Type: TF
Location: 49733 - 50797 (+)
Type: TF
Location: 49733 - 50797 (+)
Gene ID: HRGMv2_2950_40_42
Type: CAZyme
Location: 50870 - 52921 (-)
Type: CAZyme
Location: 50870 - 52921 (-)
Gene ID: HRGMv2_2950_40_43
Type: CAZyme
Location: 53346 - 55136 (-)
Type: CAZyme
Location: 53346 - 55136 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caccousia
Species
Caccousia sp900752115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.