Cluster: HRGMv2_2950_CGC20
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2950
- CGC Family ID: CGCFAM_07409
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2950_37 | HRGMv2_2950_37_17 | 20990 | 22798 | - | 8.A.59.2.1 |
| TC | HRGMv2_2950_37 | HRGMv2_2950_37_18 | 23025 | 23990 | + | 3.A.1.1.29 |
| TC | HRGMv2_2950_37 | HRGMv2_2950_37_19 | 24004 | 24885 | + | 3.A.1.1.29 |
| STP | HRGMv2_2950_37 | HRGMv2_2950_37_20 | 24940 | 26541 | + | SBP_bac_1 |
| CAZyme | HRGMv2_2950_37 | HRGMv2_2950_37_21 | 26730 | 29396 | + | GH95 |
| TC | HRGMv2_2950_37 | HRGMv2_2950_37_22 | 29990 | 31393 | + | 2.A.22.5.3 |
Gene ID: HRGMv2_2950_37_17
Type: TC
Location: 20990 - 22798 (-)
Type: TC
Location: 20990 - 22798 (-)
Gene ID: HRGMv2_2950_37_18
Type: TC
Location: 23025 - 23990 (+)
Type: TC
Location: 23025 - 23990 (+)
Gene ID: HRGMv2_2950_37_19
Type: TC
Location: 24004 - 24885 (+)
Type: TC
Location: 24004 - 24885 (+)
Gene ID: HRGMv2_2950_37_20
Type: STP
Location: 24940 - 26541 (+)
Type: STP
Location: 24940 - 26541 (+)
Gene ID: HRGMv2_2950_37_21
Type: CAZyme
Location: 26730 - 29396 (+)
Type: CAZyme
Location: 26730 - 29396 (+)
Gene ID: HRGMv2_2950_37_22
Type: TC
Location: 29990 - 31393 (+)
Type: TC
Location: 29990 - 31393 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caccousia
Species
Caccousia sp900752115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.