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Cluster: HRGMv2_2950_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2950_25 HRGMv2_2950_25_71 88597 89439 - 3.A.1.1.28
TC HRGMv2_2950_25 HRGMv2_2950_25_72 89436 90326 - 3.A.1.1.28
STP HRGMv2_2950_25 HRGMv2_2950_25_73 90487 91815 - SBP_bac_1
pfam HRGMv2_2950_25 HRGMv2_2950_25_74 91842 92789 - URO-D
TC HRGMv2_2950_25 HRGMv2_2950_25_75 93189 95018 + 8.A.59.2.1
CAZyme HRGMv2_2950_25 HRGMv2_2950_25_76 95103 96188 - GH105
TC HRGMv2_2950_25 HRGMv2_2950_25_77 96206 97186 - 8.A.5.1.6
Gene ID: HRGMv2_2950_25_71
Type: TC
Location: 88597 - 89439 (-)
Gene ID: HRGMv2_2950_25_72
Type: TC
Location: 89436 - 90326 (-)
Gene ID: HRGMv2_2950_25_73
Type: STP
Location: 90487 - 91815 (-)
Gene ID: HRGMv2_2950_25_74
Type: pfam
Location: 91842 - 92789 (-)
Gene ID: HRGMv2_2950_25_75
Type: TC
Location: 93189 - 95018 (+)
Gene ID: HRGMv2_2950_25_76
Type: CAZyme
Location: 95103 - 96188 (-)
Gene ID: HRGMv2_2950_25_77
Type: TC
Location: 96206 - 97186 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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