Cluster: HRGMv2_2950_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2950
- CGC Family ID: CGCFAM_00278
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2950_24 | HRGMv2_2950_24_40 | 47805 | 48764 | + | 3.A.1.1.29 |
| TC | HRGMv2_2950_24 | HRGMv2_2950_24_41 | 48783 | 49673 | + | 3.A.1.1.29 |
| STP | HRGMv2_2950_24 | HRGMv2_2950_24_42 | 49709 | 51394 | + | SBP_bac_1 |
| TC | HRGMv2_2950_24 | HRGMv2_2950_24_43 | 51591 | 53423 | + | 8.A.59.2.1 |
| TF | HRGMv2_2950_24 | HRGMv2_2950_24_44 | 53416 | 54552 | + | HTH_AraC |
| CAZyme | HRGMv2_2950_24 | HRGMv2_2950_24_45 | 54960 | 56696 | + | GH2 |
Gene ID: HRGMv2_2950_24_40
Type: TC
Location: 47805 - 48764 (+)
Type: TC
Location: 47805 - 48764 (+)
Gene ID: HRGMv2_2950_24_41
Type: TC
Location: 48783 - 49673 (+)
Type: TC
Location: 48783 - 49673 (+)
Gene ID: HRGMv2_2950_24_42
Type: STP
Location: 49709 - 51394 (+)
Type: STP
Location: 49709 - 51394 (+)
Gene ID: HRGMv2_2950_24_43
Type: TC
Location: 51591 - 53423 (+)
Type: TC
Location: 51591 - 53423 (+)
Gene ID: HRGMv2_2950_24_44
Type: TF
Location: 53416 - 54552 (+)
Type: TF
Location: 53416 - 54552 (+)
Gene ID: HRGMv2_2950_24_45
Type: CAZyme
Location: 54960 - 56696 (+)
Type: CAZyme
Location: 54960 - 56696 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caccousia
Species
Caccousia sp900752115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.