Cluster: HRGMv2_2950_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2950
- CGC Family ID: CGCFAM_00133
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2950_24 | HRGMv2_2950_24_9 | 8794 | 10341 | - | GH39 |
| STP | HRGMv2_2950_24 | HRGMv2_2950_24_10 | 10540 | 12342 | - | SBP_bac_1 |
| TC | HRGMv2_2950_24 | HRGMv2_2950_24_11 | 12393 | 13250 | - | 3.A.1.1.29 |
| TC | HRGMv2_2950_24 | HRGMv2_2950_24_12 | 13265 | 14215 | - | 3.A.1.1.29 |
| TF | HRGMv2_2950_24 | HRGMv2_2950_24_13 | 14365 | 15909 | - | HTH_AraC |
| TC | HRGMv2_2950_24 | HRGMv2_2950_24_14 | 15884 | 17767 | - | 8.A.59.2.1 |
| TC | HRGMv2_2950_24 | HRGMv2_2950_24_15 | 18212 | 18889 | - | 3.A.1.125.2 |
Gene ID: HRGMv2_2950_24_9
Type: CAZyme
Location: 8794 - 10341 (-)
Type: CAZyme
Location: 8794 - 10341 (-)
Gene ID: HRGMv2_2950_24_10
Type: STP
Location: 10540 - 12342 (-)
Type: STP
Location: 10540 - 12342 (-)
Gene ID: HRGMv2_2950_24_11
Type: TC
Location: 12393 - 13250 (-)
Type: TC
Location: 12393 - 13250 (-)
Gene ID: HRGMv2_2950_24_12
Type: TC
Location: 13265 - 14215 (-)
Type: TC
Location: 13265 - 14215 (-)
Gene ID: HRGMv2_2950_24_13
Type: TF
Location: 14365 - 15909 (-)
Type: TF
Location: 14365 - 15909 (-)
Gene ID: HRGMv2_2950_24_14
Type: TC
Location: 15884 - 17767 (-)
Type: TC
Location: 15884 - 17767 (-)
Gene ID: HRGMv2_2950_24_15
Type: TC
Location: 18212 - 18889 (-)
Type: TC
Location: 18212 - 18889 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caccousia
Species
Caccousia sp900752115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.