Cluster: HRGMv2_2949_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2949
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2949_8 | HRGMv2_2949_8_21 | 38261 | 39103 | - | GT8 |
| pfam | HRGMv2_2949_8 | HRGMv2_2949_8_22 | 39126 | 39668 | - | DUF308 | DUF308 | DUF308 |
| TC | HRGMv2_2949_8 | HRGMv2_2949_8_23 | 39665 | 41494 | - | 3.A.25.2.1 |
Gene ID: HRGMv2_2949_8_21
Type: CAZyme
Location: 38261 - 39103 (-)
Type: CAZyme
Location: 38261 - 39103 (-)
Gene ID: HRGMv2_2949_8_22
Type: pfam
Location: 39126 - 39668 (-)
Type: pfam
Location: 39126 - 39668 (-)
Gene ID: HRGMv2_2949_8_23
Type: TC
Location: 39665 - 41494 (-)
Type: TC
Location: 39665 - 41494 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Limivicinus
Species
Limivicinus sp944385705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.