Cluster: HRGMv2_2949_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2949
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2949_4 | HRGMv2_2949_4_96 | 95095 | 96462 | - | 3.A.5.2.2 |
| STP | HRGMv2_2949_4 | HRGMv2_2949_4_97 | 96466 | 96822 | - | Sigma70_r4_2 |
| CAZyme | HRGMv2_2949_4 | HRGMv2_2949_4_98 | 97040 | 104077 | + | GH94 | GT84 |
Gene ID: HRGMv2_2949_4_96
Type: TC
Location: 95095 - 96462 (-)
Type: TC
Location: 95095 - 96462 (-)
Gene ID: HRGMv2_2949_4_97
Type: STP
Location: 96466 - 96822 (-)
Type: STP
Location: 96466 - 96822 (-)
Gene ID: HRGMv2_2949_4_98
Type: CAZyme
Location: 97040 - 104077 (+)
Type: CAZyme
Location: 97040 - 104077 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Limivicinus
Species
Limivicinus sp944385705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.