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Cluster: HRGMv2_2949_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2949_3 HRGMv2_2949_3_140 167431 168498 + GT2
STP HRGMv2_2949_3 HRGMv2_2949_3_141 168629 169354 + TetR_N
TC HRGMv2_2949_3 HRGMv2_2949_3_142 169542 171092 + 3.A.1.5.38
pfam HRGMv2_2949_3 HRGMv2_2949_3_143 171117 171782 + TENA_THI-4
TC HRGMv2_2949_3 HRGMv2_2949_3_144 171866 172849 + 3.A.1.5.11
TC HRGMv2_2949_3 HRGMv2_2949_3_145 172842 173732 + 3.A.1.5.39
TC HRGMv2_2949_3 HRGMv2_2949_3_146 173813 174736 + 3.A.1.5.20
TC HRGMv2_2949_3 HRGMv2_2949_3_147 174733 175716 + 3.A.1.5.15
Gene ID: HRGMv2_2949_3_140
Type: CAZyme
Location: 167431 - 168498 (+)
Gene ID: HRGMv2_2949_3_141
Type: STP
Location: 168629 - 169354 (+)
Gene ID: HRGMv2_2949_3_142
Type: TC
Location: 169542 - 171092 (+)
Gene ID: HRGMv2_2949_3_143
Type: pfam
Location: 171117 - 171782 (+)
Gene ID: HRGMv2_2949_3_144
Type: TC
Location: 171866 - 172849 (+)
Gene ID: HRGMv2_2949_3_145
Type: TC
Location: 172842 - 173732 (+)
Gene ID: HRGMv2_2949_3_146
Type: TC
Location: 173813 - 174736 (+)
Gene ID: HRGMv2_2949_3_147
Type: TC
Location: 174733 - 175716 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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