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Cluster: HRGMv2_2949_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2949_2 HRGMv2_2949_2_112 114759 115709 - 3.A.1.5.22
TC HRGMv2_2949_2 HRGMv2_2949_2_113 115709 116686 - 3.A.1.5.2
TC HRGMv2_2949_2 HRGMv2_2949_2_114 116702 117583 - 3.A.1.5.20
TC HRGMv2_2949_2 HRGMv2_2949_2_115 117628 118557 - 3.A.1.5.11
TC HRGMv2_2949_2 HRGMv2_2949_2_116 118634 120217 - 3.A.1.5.27
pfam HRGMv2_2949_2 HRGMv2_2949_2_117 120301 121485 - FGE-sulfatase | mtd_2nd
NULL(UNKNOWN) HRGMv2_2949_2 HRGMv2_2949_2_118 121478 121762 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2949_2 HRGMv2_2949_2_119 121774 122850 - GH109
Gene ID: HRGMv2_2949_2_112
Type: TC
Location: 114759 - 115709 (-)
Gene ID: HRGMv2_2949_2_113
Type: TC
Location: 115709 - 116686 (-)
Gene ID: HRGMv2_2949_2_114
Type: TC
Location: 116702 - 117583 (-)
Gene ID: HRGMv2_2949_2_115
Type: TC
Location: 117628 - 118557 (-)
Gene ID: HRGMv2_2949_2_116
Type: TC
Location: 118634 - 120217 (-)
Gene ID: HRGMv2_2949_2_117
Type: pfam
Location: 120301 - 121485 (-)
Gene ID: HRGMv2_2949_2_118
Type:
Location: 121478 - 121762 (-)
Gene ID: HRGMv2_2949_2_119
Type: CAZyme
Location: 121774 - 122850 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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