Cluster: HRGMv2_2949_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2949
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2949_23 | HRGMv2_2949_23_14 | 16725 | 18056 | + | 3.A.1.1.45 |
| TC | HRGMv2_2949_23 | HRGMv2_2949_23_15 | 18252 | 19103 | + | 3.A.1.1.45 |
| TC | HRGMv2_2949_23 | HRGMv2_2949_23_16 | 19103 | 19945 | + | 3.A.1.1.45 |
| CAZyme | HRGMv2_2949_23 | HRGMv2_2949_23_17 | 19973 | 21556 | + | GH77 |
Gene ID: HRGMv2_2949_23_14
Type: TC
Location: 16725 - 18056 (+)
Type: TC
Location: 16725 - 18056 (+)
Gene ID: HRGMv2_2949_23_15
Type: TC
Location: 18252 - 19103 (+)
Type: TC
Location: 18252 - 19103 (+)
Gene ID: HRGMv2_2949_23_16
Type: TC
Location: 19103 - 19945 (+)
Type: TC
Location: 19103 - 19945 (+)
Gene ID: HRGMv2_2949_23_17
Type: CAZyme
Location: 19973 - 21556 (+)
Type: CAZyme
Location: 19973 - 21556 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Limivicinus
Species
Limivicinus sp944385705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.