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Cluster: HRGMv2_2949_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2949_11 HRGMv2_2949_11_56 64375 65835 - 2.A.66.2.2
CAZyme HRGMv2_2949_11 HRGMv2_2949_11_57 65832 66953 - GT4
pfam HRGMv2_2949_11 HRGMv2_2949_11_58 66957 67346 - ATPgrasp_TupA
pfam HRGMv2_2949_11 HRGMv2_2949_11_59 67563 67877 - ATPgrasp_TupA
CAZyme HRGMv2_2949_11 HRGMv2_2949_11_60 67879 68964 - GT4
pfam HRGMv2_2949_11 HRGMv2_2949_11_61 68971 69705 - DUF2334
CAZyme HRGMv2_2949_11 HRGMv2_2949_11_62 69702 70802 - GT4
CAZyme HRGMv2_2949_11 HRGMv2_2949_11_63 70799 71890 - GT4
pfam HRGMv2_2949_11 HRGMv2_2949_11_64 71892 72782 - 3Beta_HSD | Epimerase | NmrA | NAD_binding_10
TC HRGMv2_2949_11 HRGMv2_2949_11_65 72779 73393 - 9.B.18.1.1
Gene ID: HRGMv2_2949_11_56
Type: TC
Location: 64375 - 65835 (-)
Gene ID: HRGMv2_2949_11_57
Type: CAZyme
Location: 65832 - 66953 (-)
Gene ID: HRGMv2_2949_11_58
Type: pfam
Location: 66957 - 67346 (-)
Gene ID: HRGMv2_2949_11_59
Type: pfam
Location: 67563 - 67877 (-)
Gene ID: HRGMv2_2949_11_60
Type: CAZyme
Location: 67879 - 68964 (-)
Gene ID: HRGMv2_2949_11_61
Type: pfam
Location: 68971 - 69705 (-)
Gene ID: HRGMv2_2949_11_62
Type: CAZyme
Location: 69702 - 70802 (-)
Gene ID: HRGMv2_2949_11_63
Type: CAZyme
Location: 70799 - 71890 (-)
Gene ID: HRGMv2_2949_11_64
Type: pfam
Location: 71892 - 72782 (-)
Gene ID: HRGMv2_2949_11_65
Type: TC
Location: 72779 - 73393 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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