Cluster: HRGMv2_2949_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2949
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2949_9 | HRGMv2_2949_9_32 | 34283 | 35056 | - | CE14 |
| TC | HRGMv2_2949_9 | HRGMv2_2949_9_33 | 35053 | 36540 | - | 2.A.2.2.3 |
| pfam | HRGMv2_2949_9 | HRGMv2_2949_9_34 | 36541 | 37077 | - | Isochorismatase |
| STP | HRGMv2_2949_9 | HRGMv2_2949_9_35 | 37115 | 37480 | - | Glyoxalase |
| CAZyme | HRGMv2_2949_9 | HRGMv2_2949_9_36 | 37668 | 39050 | + | GT4 |
Gene ID: HRGMv2_2949_9_32
Type: CAZyme
Location: 34283 - 35056 (-)
Type: CAZyme
Location: 34283 - 35056 (-)
Gene ID: HRGMv2_2949_9_33
Type: TC
Location: 35053 - 36540 (-)
Type: TC
Location: 35053 - 36540 (-)
Gene ID: HRGMv2_2949_9_34
Type: pfam
Location: 36541 - 37077 (-)
Type: pfam
Location: 36541 - 37077 (-)
Gene ID: HRGMv2_2949_9_35
Type: STP
Location: 37115 - 37480 (-)
Type: STP
Location: 37115 - 37480 (-)
Gene ID: HRGMv2_2949_9_36
Type: CAZyme
Location: 37668 - 39050 (+)
Type: CAZyme
Location: 37668 - 39050 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Limivicinus
Species
Limivicinus sp944385705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.