Cluster: HRGMv2_2947_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2947
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2947_20 | HRGMv2_2947_20_15 | 13274 | 15487 | + | GH95 |
| pfam | HRGMv2_2947_20 | HRGMv2_2947_20_16 | 16060 | 17025 | + | ROK |
| TC | HRGMv2_2947_20 | HRGMv2_2947_20_17 | 17030 | 18613 | + | 2.A.2.3.6 |
| pfam | HRGMv2_2947_20 | HRGMv2_2947_20_18 | 18764 | 20821 | + | DUF5054 |
| NULL(UNKNOWN) | HRGMv2_2947_20 | HRGMv2_2947_20_19 | 20818 | 22782 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2947_20 | HRGMv2_2947_20_20 | 22786 | 25104 | + | GH2 |
Gene ID: HRGMv2_2947_20_15
Type: CAZyme
Location: 13274 - 15487 (+)
Type: CAZyme
Location: 13274 - 15487 (+)
Gene ID: HRGMv2_2947_20_16
Type: pfam
Location: 16060 - 17025 (+)
Type: pfam
Location: 16060 - 17025 (+)
Gene ID: HRGMv2_2947_20_17
Type: TC
Location: 17030 - 18613 (+)
Type: TC
Location: 17030 - 18613 (+)
Gene ID: HRGMv2_2947_20_18
Type: pfam
Location: 18764 - 20821 (+)
Type: pfam
Location: 18764 - 20821 (+)
Gene ID: HRGMv2_2947_20_19
Type:
Location: 20818 - 22782 (+)
Type:
Location: 20818 - 22782 (+)
Gene ID: HRGMv2_2947_20_20
Type: CAZyme
Location: 22786 - 25104 (+)
Type: CAZyme
Location: 22786 - 25104 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.