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Cluster: HRGMv2_2947_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2947_17 HRGMv2_2947_17_14 14400 15452 + 2.A.19.5.3
pfam HRGMv2_2947_17 HRGMv2_2947_17_15 15540 18110 - FtsX | FtsX
TC HRGMv2_2947_17 HRGMv2_2947_17_16 18107 18790 - 3.A.1.125.3
TC HRGMv2_2947_17 HRGMv2_2947_17_17 19161 20153 - 2.A.21.9.2
TF HRGMv2_2947_17 HRGMv2_2947_17_18 20146 20823 - Trans_reg_C
CAZyme HRGMv2_2947_17 HRGMv2_2947_17_19 20964 23423 - GH3
pfam HRGMv2_2947_17 HRGMv2_2947_17_20 23636 25045 - GatB_Yqey | GatB_N
TC HRGMv2_2947_17 HRGMv2_2947_17_21 25042 26502 - 3.A.9.1.1
Gene ID: HRGMv2_2947_17_14
Type: TC
Location: 14400 - 15452 (+)
Gene ID: HRGMv2_2947_17_15
Type: pfam
Location: 15540 - 18110 (-)
Gene ID: HRGMv2_2947_17_16
Type: TC
Location: 18107 - 18790 (-)
Gene ID: HRGMv2_2947_17_17
Type: TC
Location: 19161 - 20153 (-)
Gene ID: HRGMv2_2947_17_18
Type: TF
Location: 20146 - 20823 (-)
Gene ID: HRGMv2_2947_17_19
Type: CAZyme
Location: 20964 - 23423 (-)
Gene ID: HRGMv2_2947_17_20
Type: pfam
Location: 23636 - 25045 (-)
Gene ID: HRGMv2_2947_17_21
Type: TC
Location: 25042 - 26502 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Acutalibacteraceae
→
Genus
Eubacterium_R
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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