Cluster: HRGMv2_2947_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2947
- CGC Family ID: CGCFAM_03596
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2947_11 | HRGMv2_2947_11_15 | 19383 | 22043 | + | 3.A.3.2.21 |
| TC | HRGMv2_2947_11 | HRGMv2_2947_11_16 | 22304 | 24313 | - | 3.A.3.6.10 |
| TF | HRGMv2_2947_11 | HRGMv2_2947_11_17 | 24316 | 24615 | - | HTH_5 |
| pfam | HRGMv2_2947_11 | HRGMv2_2947_11_18 | 24660 | 25331 | - | DUF421 |
| TC | HRGMv2_2947_11 | HRGMv2_2947_11_19 | 25743 | 26336 | + | 2.A.87.1.3 |
| CAZyme | HRGMv2_2947_11 | HRGMv2_2947_11_20 | 26418 | 27353 | + | GT2 |
Gene ID: HRGMv2_2947_11_15
Type: TC
Location: 19383 - 22043 (+)
Type: TC
Location: 19383 - 22043 (+)
Gene ID: HRGMv2_2947_11_16
Type: TC
Location: 22304 - 24313 (-)
Type: TC
Location: 22304 - 24313 (-)
Gene ID: HRGMv2_2947_11_17
Type: TF
Location: 24316 - 24615 (-)
Type: TF
Location: 24316 - 24615 (-)
Gene ID: HRGMv2_2947_11_18
Type: pfam
Location: 24660 - 25331 (-)
Type: pfam
Location: 24660 - 25331 (-)
Gene ID: HRGMv2_2947_11_19
Type: TC
Location: 25743 - 26336 (+)
Type: TC
Location: 25743 - 26336 (+)
Gene ID: HRGMv2_2947_11_20
Type: CAZyme
Location: 26418 - 27353 (+)
Type: CAZyme
Location: 26418 - 27353 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.