Cluster: HRGMv2_2947_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2947
- CGC Family ID: CGCFAM_05540
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2947_74 | HRGMv2_2947_74_1 | 1 | 1377 | - | 2.A.2.3.3 |
| TF | HRGMv2_2947_74 | HRGMv2_2947_74_2 | 1503 | 2345 | - | HTH_AraC |
| CAZyme | HRGMv2_2947_74 | HRGMv2_2947_74_3 | 2525 | 3889 | + | GH4 |
| CAZyme | HRGMv2_2947_74 | HRGMv2_2947_74_4 | 3960 | 7097 | + | GH38 |
| CAZyme | HRGMv2_2947_74 | HRGMv2_2947_74_5 | 7257 | 8339 | + | GT2 |
Gene ID: HRGMv2_2947_74_1
Type: TC
Location: 1 - 1377 (-)
Type: TC
Location: 1 - 1377 (-)
Gene ID: HRGMv2_2947_74_2
Type: TF
Location: 1503 - 2345 (-)
Type: TF
Location: 1503 - 2345 (-)
Gene ID: HRGMv2_2947_74_3
Type: CAZyme
Location: 2525 - 3889 (+)
Type: CAZyme
Location: 2525 - 3889 (+)
Gene ID: HRGMv2_2947_74_4
Type: CAZyme
Location: 3960 - 7097 (+)
Type: CAZyme
Location: 3960 - 7097 (+)
Gene ID: HRGMv2_2947_74_5
Type: CAZyme
Location: 7257 - 8339 (+)
Type: CAZyme
Location: 7257 - 8339 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.