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Cluster: HRGMv2_2947_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2947_3 HRGMv2_2947_3_12 13891 15774 + 9.B.18.2.1
TC HRGMv2_2947_3 HRGMv2_2947_3_13 15805 17205 + 2.A.38.4.1
TC HRGMv2_2947_3 HRGMv2_2947_3_14 17310 17951 + 2.A.38.4.5
pfam HRGMv2_2947_3 HRGMv2_2947_3_15 17967 18740 + KduI
STP HRGMv2_2947_3 HRGMv2_2947_3_16 18901 19770 + SBP_bac_3
TC HRGMv2_2947_3 HRGMv2_2947_3_17 19871 20581 + 3.A.1.3.20
TC HRGMv2_2947_3 HRGMv2_2947_3_18 20565 21287 + 3.A.1.3.25
CAZyme HRGMv2_2947_3 HRGMv2_2947_3_19 21387 22715 - CE4
TC HRGMv2_2947_3 HRGMv2_2947_3_20 23009 24919 + 3.D.1.4.2
TC HRGMv2_2947_3 HRGMv2_2947_3_21 24919 25806 + 3.D.1.4.2
TC HRGMv2_2947_3 HRGMv2_2947_3_22 25810 26244 + 3.D.1.4.2
pfam HRGMv2_2947_3 HRGMv2_2947_3_23 26245 26637 + Complex1_30kDa
TC HRGMv2_2947_3 HRGMv2_2947_3_24 26637 27716 + 3.D.1.4.2
TC HRGMv2_2947_3 HRGMv2_2947_3_25 27728 28309 + 3.D.1.4.2
Gene ID: HRGMv2_2947_3_12
Type: TC
Location: 13891 - 15774 (+)
Gene ID: HRGMv2_2947_3_13
Type: TC
Location: 15805 - 17205 (+)
Gene ID: HRGMv2_2947_3_14
Type: TC
Location: 17310 - 17951 (+)
Gene ID: HRGMv2_2947_3_15
Type: pfam
Location: 17967 - 18740 (+)
Gene ID: HRGMv2_2947_3_16
Type: STP
Location: 18901 - 19770 (+)
Gene ID: HRGMv2_2947_3_17
Type: TC
Location: 19871 - 20581 (+)
Gene ID: HRGMv2_2947_3_18
Type: TC
Location: 20565 - 21287 (+)
Gene ID: HRGMv2_2947_3_19
Type: CAZyme
Location: 21387 - 22715 (-)
Gene ID: HRGMv2_2947_3_20
Type: TC
Location: 23009 - 24919 (+)
Gene ID: HRGMv2_2947_3_21
Type: TC
Location: 24919 - 25806 (+)
Gene ID: HRGMv2_2947_3_22
Type: TC
Location: 25810 - 26244 (+)
Gene ID: HRGMv2_2947_3_23
Type: pfam
Location: 26245 - 26637 (+)
Gene ID: HRGMv2_2947_3_24
Type: TC
Location: 26637 - 27716 (+)
Gene ID: HRGMv2_2947_3_25
Type: TC
Location: 27728 - 28309 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Acutalibacteraceae
→
Genus
Eubacterium_R
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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