Cluster: HRGMv2_2947_CGC18
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 8
- Substrate:
- Genome ID: HRGMv2_2947
- CGC Family ID: CGCFAM_03519
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2947_54 | HRGMv2_2947_54_1 | 2 | 712 | - | 2.A.66.1.40 |
| pfam | HRGMv2_2947_54 | HRGMv2_2947_54_2 | 709 | 1785 | - | PS_pyruv_trans |
| CAZyme | HRGMv2_2947_54 | HRGMv2_2947_54_3 | 1817 | 2764 | - | GT2 |
| CAZyme | HRGMv2_2947_54 | HRGMv2_2947_54_4 | 2764 | 3774 | - | GT2 |
| CAZyme | HRGMv2_2947_54 | HRGMv2_2947_54_5 | 3767 | 4663 | - | GT14 |
| CAZyme | HRGMv2_2947_54 | HRGMv2_2947_54_6 | 4691 | 5623 | - | GT2 |
| CAZyme | HRGMv2_2947_54 | HRGMv2_2947_54_7 | 5620 | 6642 | - | GT2 |
| pfam | HRGMv2_2947_54 | HRGMv2_2947_54_8 | 6651 | 7664 | - | Acyl_transf_3 |
| pfam | HRGMv2_2947_54 | HRGMv2_2947_54_9 | 7694 | 8893 | - | EpsG |
| CAZyme | HRGMv2_2947_54 | HRGMv2_2947_54_10 | 8910 | 10028 | - | GT4 |
| CAZyme | HRGMv2_2947_54 | HRGMv2_2947_54_11 | 10059 | 11138 | - | GT4 |
| CAZyme | HRGMv2_2947_54 | HRGMv2_2947_54_12 | 11135 | 12271 | - | GT4 |
| pfam | HRGMv2_2947_54 | HRGMv2_2947_54_13 | 12274 | 13185 | - | 2-Hacid_dh | 2-Hacid_dh_C |
| TC | HRGMv2_2947_54 | HRGMv2_2947_54_14 | 13211 | 13831 | - | 9.B.18.1.3 |
Gene ID: HRGMv2_2947_54_1
Type: TC
Location: 2 - 712 (-)
Type: TC
Location: 2 - 712 (-)
Gene ID: HRGMv2_2947_54_2
Type: pfam
Location: 709 - 1785 (-)
Type: pfam
Location: 709 - 1785 (-)
Gene ID: HRGMv2_2947_54_3
Type: CAZyme
Location: 1817 - 2764 (-)
Type: CAZyme
Location: 1817 - 2764 (-)
Gene ID: HRGMv2_2947_54_4
Type: CAZyme
Location: 2764 - 3774 (-)
Type: CAZyme
Location: 2764 - 3774 (-)
Gene ID: HRGMv2_2947_54_5
Type: CAZyme
Location: 3767 - 4663 (-)
Type: CAZyme
Location: 3767 - 4663 (-)
Gene ID: HRGMv2_2947_54_6
Type: CAZyme
Location: 4691 - 5623 (-)
Type: CAZyme
Location: 4691 - 5623 (-)
Gene ID: HRGMv2_2947_54_7
Type: CAZyme
Location: 5620 - 6642 (-)
Type: CAZyme
Location: 5620 - 6642 (-)
Gene ID: HRGMv2_2947_54_8
Type: pfam
Location: 6651 - 7664 (-)
Type: pfam
Location: 6651 - 7664 (-)
Gene ID: HRGMv2_2947_54_9
Type: pfam
Location: 7694 - 8893 (-)
Type: pfam
Location: 7694 - 8893 (-)
Gene ID: HRGMv2_2947_54_10
Type: CAZyme
Location: 8910 - 10028 (-)
Type: CAZyme
Location: 8910 - 10028 (-)
Gene ID: HRGMv2_2947_54_11
Type: CAZyme
Location: 10059 - 11138 (-)
Type: CAZyme
Location: 10059 - 11138 (-)
Gene ID: HRGMv2_2947_54_12
Type: CAZyme
Location: 11135 - 12271 (-)
Type: CAZyme
Location: 11135 - 12271 (-)
Gene ID: HRGMv2_2947_54_13
Type: pfam
Location: 12274 - 13185 (-)
Type: pfam
Location: 12274 - 13185 (-)
Gene ID: HRGMv2_2947_54_14
Type: TC
Location: 13211 - 13831 (-)
Type: TC
Location: 13211 - 13831 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.