Cluster: HRGMv2_2947_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2947
- CGC Family ID: CGCFAM_03724
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2947_50 | HRGMv2_2947_50_4 | 3311 | 4021 | - | 3.A.16.1.3 |
| CAZyme | HRGMv2_2947_50 | HRGMv2_2947_50_5 | 4373 | 6016 | - | GH36 |
| CAZyme | HRGMv2_2947_50 | HRGMv2_2947_50_6 | 6128 | 7624 | + | GH20 |
| NULL(UNKNOWN) | HRGMv2_2947_50 | HRGMv2_2947_50_7 | 7966 | 9951 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2947_50 | HRGMv2_2947_50_8 | 9948 | 10556 | + | 3.A.1.122.8 |
Gene ID: HRGMv2_2947_50_4
Type: TC
Location: 3311 - 4021 (-)
Type: TC
Location: 3311 - 4021 (-)
Gene ID: HRGMv2_2947_50_5
Type: CAZyme
Location: 4373 - 6016 (-)
Type: CAZyme
Location: 4373 - 6016 (-)
Gene ID: HRGMv2_2947_50_6
Type: CAZyme
Location: 6128 - 7624 (+)
Type: CAZyme
Location: 6128 - 7624 (+)
Gene ID: HRGMv2_2947_50_7
Type:
Location: 7966 - 9951 (+)
Type:
Location: 7966 - 9951 (+)
Gene ID: HRGMv2_2947_50_8
Type: TC
Location: 9948 - 10556 (+)
Type: TC
Location: 9948 - 10556 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.